The links below are to publications on PubMed referring to PennCNV. This list is gathered weekly from PubMed automatically.

Publication/References
The Human-Specific BOLA2 Duplication Modifies Iron Homeostasis and Anemia Predisposition in Chromosome 16p11.2 Autism Individuals.
Description: Giannuzzi, Giuliana, et al. The Human-Specific BOLA2 Duplication Modifies Iron Homeostasis and Anemia Predisposition in Chromosome 16p11.2 Autism Individuals. ''Am J Hum Genet''. 2019 Nov 7; '''105''' (5):947-958
Intratumor heterogeneity and homologous recombination deficiency of high-grade serous ovarian cancer are associated with prognosis and molecular subtype and change in treatment course.
Description: Takaya, Hisamitsu, et al. Intratumor heterogeneity and homologous recombination deficiency of high-grade serous ovarian cancer are associated with prognosis and molecular subtype and change in treatment course. ''Gynecol Oncol''. 2020 Feb; '''156''' (2):415-422
Genetic and Functional Analyses Point to FAN1 as the Source of Multiple Huntington Disease Modifier Effects.
Description: Kim, Kyung-Hee, et al. Genetic and Functional Analyses Point to FAN1 as the Source of Multiple Huntington Disease Modifier Effects. ''Am J Hum Genet''. 2020 Jul 2; '''107''' (1):96-110
Copy number variants in siblings of Mexican origin concordant for schizophrenia or bipolar disorder.
Description: Vega-Sevey, Julissa Gabriela, et al. Copy number variants in siblings of Mexican origin concordant for schizophrenia or bipolar disorder. ''Psychiatry Res''. 2020 Sep; '''291''': 113018
Rare Copy Number Variants Are Associated With Poorer Cognition in Schizophrenia.
Description: Hubbard, Leon, et al. Rare Copy Number Variants Are Associated With Poorer Cognition in Schizophrenia. ''Biol Psychiatry''. 2021 Jul 1; '''90''' (1):28-34
Autosomal dominant lateral temporal epilepsy in a family exhibiting a rare heterozygous mutation and deletion in the leucine-rich glioma inactivated 1 gene.
Description: Liu, Jie, et al. Autosomal dominant lateral temporal epilepsy in a family exhibiting a rare heterozygous mutation and deletion in the leucine-rich glioma inactivated 1 gene. ''Neurosci Lett''. 2022 Jun 21; '''782''': 136698
Genome-wide elucidation of CNV regions and their association with production and reproduction traits in composite Vrindavani cattle.
Description: Ahmad, Sheikh Firdous, et al. Genome-wide elucidation of CNV regions and their association with production and reproduction traits in composite Vrindavani cattle. ''Gene''. 2022 Jul 1; '''830''': 146510
Lysosomal alterations and decreased electrophysiological activity in CLN3 disease patient-derived cortical neurons.
Description: Chear, Sueanne, et al. Lysosomal alterations and decreased electrophysiological activity in CLN3 disease patient-derived cortical neurons. ''Dis Model Mech''. 2022 Dec 1; '''15''' (12):
Rare copy number variation in posttraumatic stress disorder.
Description: Maihofer, Adam X, et al. Rare copy number variation in posttraumatic stress disorder. ''Mol Psychiatry''. 2022 Dec; '''27''' (12):5062-5069
Genetic landscape of Parkinson's disease and related diseases in Luxembourg.
Description: Landoulsi, Zied, et al. Genetic landscape of Parkinson's disease and related diseases in Luxembourg. ''Front Aging Neurosci''. 2023; '''15''': 1282174
Genome-scale copy number variant analysis in schizophrenia patients and controls from South India.
Description: Singh, Minali, et al. Genome-scale copy number variant analysis in schizophrenia patients and controls from South India. ''Front Mol Neurosci''. 2023; '''16''': 1268827
Genome-wide identification of disease-causing copy number variations in 450 individuals with anorectal malformations.
Description: Fabian, Julia, et al. Genome-wide identification of disease-causing copy number variations in 450 individuals with anorectal malformations. ''Eur J Hum Genet''. 2023 Jan; '''31''' (1):105-111
Identification of copy number variations in the genome of Dairy Gir cattle.
Description: Braga, Larissa G, et al. Identification of copy number variations in the genome of Dairy Gir cattle. ''PLoS One''. 2023; '''18''' (4):e0284085
Mendelian Randomisation Confirms the Role of Y-Chromosome Loss in Alzheimer's Disease Aetiopathogenesis in Men.
Description: Garcia-Gonzalez, Pablo, et al. Mendelian Randomisation Confirms the Role of Y-Chromosome Loss in Alzheimer's Disease Aetiopathogenesis in Men. ''Int J Mol Sci''. 2023 Jan 4; '''24''' (2):
The impact of 22q11.2 copy-number variants on human traits in the general population.
Description: Zamariolli, Malu, et al. The impact of 22q11.2 copy-number variants on human traits in the general population. ''Am J Hum Genet''. 2023 Feb 2; '''110''' (2):300-313
Genetic regulation of fetal hemoglobin across global populations.
Description: Cato, Liam D, et al. Genetic regulation of fetal hemoglobin across global populations. ''medRxiv''. 2023 Mar 28;
Cortical neuronal hyperexcitability and synaptic changes in SGCE mutation-positive myoclonus dystonia.
Description: Sperandeo, Alessandra, et al. Cortical neuronal hyperexcitability and synaptic changes in SGCE mutation-positive myoclonus dystonia. ''Brain''. 2023 Apr 19; '''146''' (4):1523-1541
Rare recurrent copy number variations in metabotropic glutamate receptor interacting genes in children with neurodevelopmental disorders.
Description: Glessner, Joseph T, et al. Rare recurrent copy number variations in metabotropic glutamate receptor interacting genes in children with neurodevelopmental disorders. ''J Neurodev Disord''. 2023 Apr 29; '''15''' (1):14
Recurrent 17q12 microduplications contribute to renal disease but not diabetes.
Description: Cannon, Stuart, et al. Recurrent 17q12 microduplications contribute to renal disease but not diabetes. ''J Med Genet''. 2023 May; '''60''' (5):491-497
Prevalence of Monogenic Bone Disorders in a Dutch Cohort of Atypical Femur Fracture Patients.
Description: Zhou, Wei, et al. Prevalence of Monogenic Bone Disorders in a Dutch Cohort of Atypical Femur Fracture Patients. ''J Bone Miner Res''. 2023 Jun; '''38''' (6):896-906
Rare CNVs and phenome-wide profiling highlight brain structural divergence and phenotypical convergence.
Description: Kopal, Jakub, et al. Rare CNVs and phenome-wide profiling highlight brain structural divergence and phenotypical convergence. ''Nat Hum Behav''. 2023 Jun; '''7''' (6):1001-1017
Common genetic variants contribute to heritability of age at onset of schizophrenia.
Description: Sada-Fuente, Ester, et al. Common genetic variants contribute to heritability of age at onset of schizophrenia. ''Transl Psychiatry''. 2023 Jun 13; '''13''' (1):201
High density SNP array and reanalysis of genome sequencing uncovers CNVs associated with neurodevelopmental disorders in KOLF2.1J iPSCs.
Description: Gracia-Diaz, Carolina, et al. High density SNP array and reanalysis of genome sequencing uncovers CNVs associated with neurodevelopmental disorders in KOLF2.1J iPSCs. ''bioRxiv''. 2023 Jun 26;
Noncoding variants alter GATA2 expression in rhombomere 4 motor neurons and cause dominant hereditary congenital facial paresis.
Description: Tenney, Alan P, et al. Noncoding variants alter GATA2 expression in rhombomere 4 motor neurons and cause dominant hereditary congenital facial paresis. ''Nat Genet''. 2023 Jul; '''55''' (7):1149-1163
Genome-wide identification and phenotypic characterization of seizure-associated copy number variations in 741,075 individuals.
Description: Montanucci, Ludovica, et al. Genome-wide identification and phenotypic characterization of seizure-associated copy number variations in 741,075 individuals. ''Nat Commun''. 2023 Jul 20; '''14''' (1):4392
Variant-to-function analysis of the childhood obesity chr12q13 locus implicates rs7132908 as a causal variant within the 3' UTR of FAIM2.
Description: Littleton, Sheridan H, et al. Variant-to-function analysis of the childhood obesity chr12q13 locus implicates rs7132908 as a causal variant within the 3' UTR of FAIM2. ''bioRxiv''. 2023 Aug 22;
Association of mitochondrial DNA copy number with chronic kidney disease in older adults.
Description: Liu, Yang, et al. Association of mitochondrial DNA copy number with chronic kidney disease in older adults. ''BMC Geriatr''. 2023 Aug 24; '''23''' (1):514
Structural Variations Contribute to the Genetic Etiology of Autism Spectrum Disorder and Language Impairments.
Description: Alibutud, Rohan, et al. Structural Variations Contribute to the Genetic Etiology of Autism Spectrum Disorder and Language Impairments. ''Int J Mol Sci''. 2023 Aug 26; '''24''' (17):
Rare Genomic Copy Number Variants Implicate New Candidate Genes for Bicuspid Aortic Valve.
Description: Carlisle, Steven G, et al. Rare Genomic Copy Number Variants Implicate New Candidate Genes for Bicuspid Aortic Valve. ''medRxiv''. 2023 Oct 24;
Whole genome analysis of rare deleterious variants adds further evidence to BRSK2 and other risk genes in Autism Spectrum Disorder.
Description: Bacchelli, Elena, et al. Whole genome analysis of rare deleterious variants adds further evidence to BRSK2 and other risk genes in Autism Spectrum Disorder. ''Res Sq''. 2023 Oct 28;
Genetic Association Analysis of Copy Number Variations for Meat Quality in Beef Cattle.
Description: Wu, Jiayuan, et al. Genetic Association Analysis of Copy Number Variations for Meat Quality in Beef Cattle. ''Foods''. 2023 Oct 31; '''12''' (21):
Accurate long-read sequencing identified GBA1 as major risk factor in the Luxembourgish Parkinson's study.
Description: Pachchek, Sinthuja, et al. Accurate long-read sequencing identified GBA1 as major risk factor in the Luxembourgish Parkinson's study. ''NPJ Parkinsons Dis''. 2023 Nov 23; '''9''' (1):156
A resource of induced pluripotent stem cell (iPSC) lines including clinical, genomic, and cellular data from genetically isolated families with mood and psychotic disorders.
Description: Detera-Wadleigh, Sevilla D, et al. A resource of induced pluripotent stem cell (iPSC) lines including clinical, genomic, and cellular data from genetically isolated families with mood and psychotic disorders. ''Transl Psychiatry''. 2023 Dec 16; '''13''' (1):397
Descriptive Statistics and Genome-Wide Copy Number Analysis of Milk Production Traits of Jiangsu Chinese Holstein Cows.
Description: Zhu, Hao, et al. Descriptive Statistics and Genome-Wide Copy Number Analysis of Milk Production Traits of Jiangsu Chinese Holstein Cows. ''Animals (Basel)''. 2023 Dec 19; '''14''' (1):
Improving CNV Detection Performance in Microarray Data Using a Machine Learning-Based Approach.
Description: Goh, Chul Jun, et al. Improving CNV Detection Performance in Microarray Data Using a Machine Learning-Based Approach. ''Diagnostics (Basel)''. 2023 Dec 29; '''14''' (1):
Development and validation of a pharmacogenomics reporting workflow based on the illumina global screening array chip.
Description: Gan, Pamela, et al. Development and validation of a pharmacogenomics reporting workflow based on the illumina global screening array chip. ''Front Pharmacol''. 2024; '''15''': 1349203
Rare copy number variation in autoimmune Addison's disease.
Description: Artaza, Haydee, et al. Rare copy number variation in autoimmune Addison's disease. ''Front Immunol''. 2024; '''15''': 1374499
A Burden of Rare Copy Number Variants in Obsessive-Compulsive Disorder.
Description: Halvorsen, Matthew, et al. A Burden of Rare Copy Number Variants in Obsessive-Compulsive Disorder. ''Res Sq''. 2024 Jan 3;
Rare copy-number variants as modulators of common disease susceptibility.
Description: Auwerx, Chiara, et al. Rare copy-number variants as modulators of common disease susceptibility. ''Genome Med''. 2024 Jan 8; '''16''' (1):5
Genome-wide association study between copy number variation and feeding behavior, feed efficiency, and growth traits in Nellore cattle.
Description: Benfica, Lorena F, et al. Genome-wide association study between copy number variation and feeding behavior, feed efficiency, and growth traits in Nellore cattle. ''BMC Genomics''. 2024 Jan 11; '''25''' (1):54
Genomic analysis of 116 autism families strengthens known risk genes and highlights promising candidates.
Description: Viggiano, Marta, et al. Genomic analysis of 116 autism families strengthens known risk genes and highlights promising candidates. ''NPJ Genom Med''. 2024 Mar 22; '''9''' (1):21
Landscape of genomic structural variations in Indian population-based cohorts: Deeper insights into their prevalence and clinical relevance.
Description: Subramanian, Krithika, et al. Landscape of genomic structural variations in Indian population-based cohorts: Deeper insights into their prevalence and clinical relevance. ''HGG Adv''. 2024 Mar 23; '''5''' (3):100285
Leveraging multiple approaches for the detection of pathogenic deep intronic variants in developmental and epileptic encephalopathies: A case report.
Description: Nyaga, Denis M, et al. Leveraging multiple approaches for the detection of pathogenic deep intronic variants in developmental and epileptic encephalopathies: A case report. ''Epilepsia Open''. 2024 Apr; '''9''' (2):758-764
The copy number variant architecture of psychopathology and cognitive development in the ABCD((R)) study.
Description: Sha, Zhiqiang, et al. The copy number variant architecture of psychopathology and cognitive development in the ABCD((R)) study. ''medRxiv''. 2024 May 15;
Copy number deletion of PLA2G4A affects the susceptibility and clinical phenotypes of schizophrenia.
Description: Gao, Zibo, et al. Copy number deletion of PLA2G4A affects the susceptibility and clinical phenotypes of schizophrenia. ''Schizophrenia (Heidelb)''. 2024 May 30; '''10''' (1):55
Contribution of copy number variants on antipsychotic treatment response in Han Chinese patients with schizophrenia.
Description: Sun, Yaoyao, et al. Contribution of copy number variants on antipsychotic treatment response in Han Chinese patients with schizophrenia. ''EBioMedicine''. 2024 Jul; '''105''': 105195