PubMed Mentions
The links below are to publications on PubMed referring to Mindboggle: open source software for analyzing the shapes of brain structures from human MRI data. This list is gathered weekly from PubMed automatically.
| Publication/References | |
| Brain age prediction: Cortical and subcortical shape covariation in the developing human brain. Description: Zhao, Yihong, et al. Brain age prediction: Cortical and subcortical shape covariation in the developing human brain. ''Neuroimage''. 2019 Nov 15; '''202''': 116149 | |
| Allocentric representation in the human amygdala and ventral visual stream. Description: Evensmoen, Hallvard Roe, et al. Allocentric representation in the human amygdala and ventral visual stream. ''Cell Rep''. 2021 Jan 19; '''34''' (3):108658 | |
| Representation of social content in dorsomedial prefrontal cortex underlies individual differences in agreeableness trait. Description: Arbula, Sandra, et al. Representation of social content in dorsomedial prefrontal cortex underlies individual differences in agreeableness trait. ''Neuroimage''. 2021 Jul 15; '''235''': 118049 | |
| Striatal and septo-hypothalamic responses to anticipation and outcome of affiliative rewards. Description: Bortolini, Tiago, et al. Striatal and septo-hypothalamic responses to anticipation and outcome of affiliative rewards. ''Neuroimage''. 2021 Nov; '''243''': 118474 | |
| Brain networks are decoupled from external stimuli during internal cognition. Description: Cohen, Dror, et al. Brain networks are decoupled from external stimuli during internal cognition. ''Neuroimage''. 2022 Aug 1; '''256''': 119230 | |
| Predicting brain activation maps for arbitrary tasks with cognitive encoding models. Description: Walters, Jonathon, et al. Predicting brain activation maps for arbitrary tasks with cognitive encoding models. ''Neuroimage''. 2022 Nov; '''263''': 119610 | |
| L-DOPA enhances neural direction signals in younger and older adults. Description: Koch, Christoph, et al. L-DOPA enhances neural direction signals in younger and older adults. ''Neuroimage''. 2022 Dec 1; '''264''': 119670 | |
| Differential neural reward reactivity in response to food advertising medium in children. Description: Yeum, Dabin, et al. Differential neural reward reactivity in response to food advertising medium in children. ''Front Neurosci''. 2023; '''17''': 1052384 | |
| Differential working memory function between phonological and visuospatial strategies: a magnetoencephalography study using a same visual task. Description: Onishi, Hayate, et al. Differential working memory function between phonological and visuospatial strategies: a magnetoencephalography study using a same visual task. ''Front Hum Neurosci''. 2023; '''17''': 1218437 | |
| The PyMVPA BIDS-App: a robust multivariate pattern analysis pipeline for fMRI data. Description: Torabian, Sajjad, et al. The PyMVPA BIDS-App: a robust multivariate pattern analysis pipeline for fMRI data. ''Front Neurosci''. 2023; '''17''': 1233416 | |
| Network structure influences the strength of learned neural representations. Description: Kahn, Ari E, et al. Network structure influences the strength of learned neural representations. ''bioRxiv''. 2023 Jan 24; | |
| Functional Connectivity of the Cerebellar Vermis in Bipolar Disorder and Associations with Mood. Description: Saleem, Arshaq, et al. Functional Connectivity of the Cerebellar Vermis in Bipolar Disorder and Associations with Mood. ''bioRxiv''. 2023 Feb 6; | |
| Representational integration and differentiation in the human hippocampus following goal-directed navigation. Description: Fernandez, Corey, et al. Representational integration and differentiation in the human hippocampus following goal-directed navigation. ''Elife''. 2023 Feb 14; '''12''': | |
| Modulation of amygdala activity for emotional faces due to botulinum toxin type A injections that prevent frowning. Description: Stark, Shauna, et al. Modulation of amygdala activity for emotional faces due to botulinum toxin type A injections that prevent frowning. ''Sci Rep''. 2023 Feb 27; '''13''' (1):3333 | |
| Flexible reuse of cortico-hippocampal representations during encoding and recall of naturalistic events. Description: Reagh, Zachariah M, et al. Flexible reuse of cortico-hippocampal representations during encoding and recall of naturalistic events. ''Nat Commun''. 2023 Mar 8; '''14''' (1):1279 | |
| Transfer Learning in Trajectory Decoding: Sensor or Source Space? Description: Srisrisawang, Nitikorn, et al. Transfer Learning in Trajectory Decoding: Sensor or Source Space? ''Sensors (Basel)''. 2023 Mar 30; '''23''' (7): | |
| A ready-to-use machine learning tool for symmetric multi-modality registration of brain MRI. Description: Iglesias, Juan Eugenio. A ready-to-use machine learning tool for symmetric multi-modality registration of brain MRI. ''Sci Rep''. 2023 Apr 24; '''13''' (1):6657 | |
| Poorer sleep health is associated with altered brain activation during cognitive control processing in healthy adults. Description: Smevik, Hanne, et al. Poorer sleep health is associated with altered brain activation during cognitive control processing in healthy adults. ''Cereb Cortex''. 2023 May 24; '''33''' (11):7100-7119 | |
| Task state representations in vmPFC mediate relevant and irrelevant value signals and their behavioral influence. Description: Moneta, Nir, et al. Task state representations in vmPFC mediate relevant and irrelevant value signals and their behavioral influence. ''Nat Commun''. 2023 May 31; '''14''' (1):3156 | |
| Toward a statistical validation of brain signatures as robust measures of behavioral substrates. Description: Fletcher, Evan, et al. Toward a statistical validation of brain signatures as robust measures of behavioral substrates. ''Hum Brain Mapp''. 2023 Jun 1; '''44''' (8):3094-3111 | |
| Prediction of early improvement of major depressive disorder to antidepressant medication in adolescents with radiomics analysis after ComBat harmonization based on multiscale structural MRI. Description: Ma, Huan, et al. Prediction of early improvement of major depressive disorder to antidepressant medication in adolescents with radiomics analysis after ComBat harmonization based on multiscale structural MRI. ''BMC Psychiatry''. 2023 Jun 26; '''23''' (1):466 | |
| Neural similarity in nucleus accumbens during decision-making for the self and a best friend: Links to adolescents' self-reported susceptibility to peer influence and risk taking. Description: Dai, Junqiang, et al. Neural similarity in nucleus accumbens during decision-making for the self and a best friend: Links to adolescents' self-reported susceptibility to peer influence and risk taking. ''Hum Brain Mapp''. 2023 Jul; '''44''' (10):3972-3985 | |
| Brain tissue iron neurophysiology and its relationship with the cognitive effects of dopaminergic modulation in children with and without ADHD. Description: Cascone, Arianna D, et al. Brain tissue iron neurophysiology and its relationship with the cognitive effects of dopaminergic modulation in children with and without ADHD. ''Dev Cogn Neurosci''. 2023 Jul 7; '''63''': 101274 | |
| Statistical inference on representational geometries. Description: Schutt, Heiko H, et al. Statistical inference on representational geometries. ''Elife''. 2023 Aug 23; '''12''': | |
| Placebo treatment affects brain systems related to affective and cognitive processes, but not nociceptive pain. Description: Botvinik-Nezer, Rotem, et al. Placebo treatment affects brain systems related to affective and cognitive processes, but not nociceptive pain. ''bioRxiv''. 2023 Sep 30; | |
| Aging-related volume changes in the brain and cerebrospinal fluid using artificial intelligence-automated segmentation. Description: Yamada, Shigeki, et al. Aging-related volume changes in the brain and cerebrospinal fluid using artificial intelligence-automated segmentation. ''Eur Radiol''. 2023 Oct; '''33''' (10):7099-7112 | |
| Exploring the performance of implicit neural representations for brain image registration. Description: Byra, Michal, et al. Exploring the performance of implicit neural representations for brain image registration. ''Sci Rep''. 2023 Oct 13; '''13''' (1):17334 | |
| Characteristic oscillatory brain networks for predicting patients with chronic migraine. Description: Hsiao, Fu-Jung, et al. Characteristic oscillatory brain networks for predicting patients with chronic migraine. ''J Headache Pain''. 2023 Oct 18; '''24''' (1):139 | |
| Multilayer network associations between the exposome and childhood brain development. Description: Simpson-Kent, Ivan L, et al. Multilayer network associations between the exposome and childhood brain development. ''bioRxiv''. 2023 Oct 25; | |
| Hippocampal mechanisms resolve competition in memory and perception. Description: Favila, Serra E, et al. Hippocampal mechanisms resolve competition in memory and perception. ''bioRxiv''. 2023 Nov 3; | |
| Neural signatures of emotional inference and experience align during social consensus. Description: Reddan, Marianne, et al. Neural signatures of emotional inference and experience align during social consensus. ''Res Sq''. 2023 Nov 17; | |
| The shared and unique neural correlates of personal semantic, general semantic, and episodic memory. Description: Tanguay, Annick F N, et al. The shared and unique neural correlates of personal semantic, general semantic, and episodic memory. ''Elife''. 2023 Nov 21; '''12''': | |
| Establishing the Roles of the Dorsal and Ventral Striatum in Humor Comprehension and Appreciation with fMRI. Description: Prenger, Margaret, et al. Establishing the Roles of the Dorsal and Ventral Striatum in Humor Comprehension and Appreciation with fMRI. ''J Neurosci''. 2023 Dec 6; '''43''' (49):8536-8546 | |
| Integration and segregation manifolds in the brain ensure cognitive flexibility during tasks and rest. Description: Capouskova, Katerina, et al. Integration and segregation manifolds in the brain ensure cognitive flexibility during tasks and rest. ''Hum Brain Mapp''. 2023 Dec 15; '''44''' (18):6349-6363 | |
| Structural Outlier Detection and Zernike-Canterakis Moments for Molecular Surface Meshes-Fast Implementation in Python. Description: Banach, Mateusz. Structural Outlier Detection and Zernike-Canterakis Moments for Molecular Surface Meshes-Fast Implementation in Python. ''Molecules''. 2023 Dec 21; '''29''' (1): | |
| Human brain activity and functional connectivity associated with verbal long-term memory consolidation across 1 month. Description: Tallman, Catherine W, et al. Human brain activity and functional connectivity associated with verbal long-term memory consolidation across 1 month. ''Front Hum Neurosci''. 2024; '''18''': 1342552 | |
| Relationship Between Resting State Functional Connectivity and Reading-Related Behavioural Measures in 69 Adults. Description: Bathelt, Joe, et al. Relationship Between Resting State Functional Connectivity and Reading-Related Behavioural Measures in 69 Adults. ''Neurobiol Lang (Camb)''. 2024; '''5''' (2):589-607 | |
| A multi-sample evaluation of the measurement structure and function of the modified monetary incentive delay task in adolescents. Description: Demidenko, Michael I, et al. A multi-sample evaluation of the measurement structure and function of the modified monetary incentive delay task in adolescents. ''Dev Cogn Neurosci''. 2024 Feb; '''65''': 101337 | |
| Cortical and subcortical microstructure integrity changes after repetitive transcranial magnetic stimulation therapy in cocaine use disorder and relates to clinical outcomes. Description: Rasgado-Toledo, Jalil, et al. Cortical and subcortical microstructure integrity changes after repetitive transcranial magnetic stimulation therapy in cocaine use disorder and relates to clinical outcomes. ''Addict Biol''. 2024 Feb; '''29''' (2):e13381 | |
| Adolescents' pain-related ontogeny shares a neural basis with adults' chronic pain in basothalamo-cortical organization. Description: Heukamp, Nils Jannik, et al. Adolescents' pain-related ontogeny shares a neural basis with adults' chronic pain in basothalamo-cortical organization. ''iScience''. 2024 Feb 16; '''27''' (2):108954 | |
| Multimodal single-neuron, intracranial EEG, and fMRI brain responses during movie watching in human patients. Description: Keles, Umit, et al. Multimodal single-neuron, intracranial EEG, and fMRI brain responses during movie watching in human patients. ''Sci Data''. 2024 Feb 16; '''11''' (1):214 | |
| Non-invasive neuromodulation of cerebello-hippocampal volume-behavior relationships. Description: Magalhaes, Thamires N C, et al. Non-invasive neuromodulation of cerebello-hippocampal volume-behavior relationships. ''bioRxiv''. 2024 Apr 1; | |
| Lateral frontoparietal functional connectivity based on individual sulcal morphology. Description: Hakkinen, Suvi, et al. Lateral frontoparietal functional connectivity based on individual sulcal morphology. ''bioRxiv''. 2024 Apr 18; | |
| Reliability and predictability of phenotype information from functional connectivity in large imaging datasets. Description: Dafflon, Jessica, et al. Reliability and predictability of phenotype information from functional connectivity in large imaging datasets. ''ArXiv''. 2024 May 1; | |
| The Brain's Topographical Organization Shapes Dynamic Interaction Patterns That Support Flexible Behavior Based on Rules and Long-Term Knowledge. Description: Wang, Xiuyi, et al. The Brain's Topographical Organization Shapes Dynamic Interaction Patterns That Support Flexible Behavior Based on Rules and Long-Term Knowledge. ''J Neurosci''. 2024 May 29; '''44''' (22): | |
| Microscopic fractional anisotropy outperforms multiple sclerosis lesion assessment and clinical outcome associations over standard fractional anisotropy tensor. Description: Vivo, F, et al. Microscopic fractional anisotropy outperforms multiple sclerosis lesion assessment and clinical outcome associations over standard fractional anisotropy tensor. ''Hum Brain Mapp''. 2024 Jun 1; '''45''' (8):e26706 | |
| Longitudinal Neuroanatomical Increases from Early to One-Year Postpartum. Description: Dufford, Alexander, et al. Longitudinal Neuroanatomical Increases from Early to One-Year Postpartum. ''Res Sq''. 2024 Jun 3; | |
| Understanding the role of cerebellum in early Parkinson's disease: a structural and functional MRI study. Description: Pietracupa, S, et al. Understanding the role of cerebellum in early Parkinson's disease: a structural and functional MRI study. ''NPJ Parkinsons Dis''. 2024 Jun 19; '''10''' (1):119 | |
| Reconfigurations of cortical manifold structure during reward-based motor learning. Description: Nick, Qasem, et al. Reconfigurations of cortical manifold structure during reward-based motor learning. ''Elife''. 2024 Jun 25; '''12''': |