The links below are to publications on PubMed referring to Seg3D. This list is gathered weekly from PubMed automatically and was last updated on December 17, 2025.

Publication/References
Heart and liver connexin expression related to the first stage of aging: A study on naturally aged animals.
Description: Moscato, Stefania, et al. Heart and liver connexin expression related to the first stage of aging: A study on naturally aged animals. ''Acta Histochem''. 2020 Dec; '''122''' (8):151651
Projective Diffeomorphic Mapping of Molecular Digital Pathology with Tissue MRI.
Description: Stouffer, Kaitlin M, et al. Projective Diffeomorphic Mapping of Molecular Digital Pathology with Tissue MRI. ''Commun Eng''. 2022; '''1''':
Early amygdala and ERC atrophy linked to 3D reconstruction of rostral neurofibrillary tau tangle pathology in Alzheimer's disease.
Description: Stouffer, Kaitlin M, et al. Early amygdala and ERC atrophy linked to 3D reconstruction of rostral neurofibrillary tau tangle pathology in Alzheimer's disease. ''Neuroimage Clin''. 2023 Mar 15; '''38''': 103374
High-resolution volumetric imaging constrains compartmental models to explore synaptic integration and temporal processing by cochlear nucleus globular bushy cells.
Description: Spirou, George A, et al. High-resolution volumetric imaging constrains compartmental models to explore synaptic integration and temporal processing by cochlear nucleus globular bushy cells. ''Elife''. 2023 Jun 8; '''12''':
How to assess the accuracy of volume conduction models? A validation study with stereotactic EEG data.
Description: Piastra, Maria Carla, et al. How to assess the accuracy of volume conduction models? A validation study with stereotactic EEG data. ''Front Hum Neurosci''. 2024; '''18''': 1279183
Assessing midbrain neuromelanin and its relationship to reward learning in anorexia nervosa: Stage 1 of a registered report.
Description: Murray, Stuart B, et al. Assessing midbrain neuromelanin and its relationship to reward learning in anorexia nervosa: Stage 1 of a registered report. ''Brain Behav''. 2024 Jun; '''14''' (6):e3573
Structure-Mechanics Principles and Mechanobiology of Fibrocartilage Pericellular Matrix: A Pivotal Role of Type V Collagen.
Description: Wang, Chao, et al. Structure-Mechanics Principles and Mechanobiology of Fibrocartilage Pericellular Matrix: A Pivotal Role of Type V Collagen. ''bioRxiv''. 2024 Jun 30;
A pilot study comparing three-dimensional models of tumor histopathology and magnetic resonance imaging.
Description: Koivuholma, Anne, et al. A pilot study comparing three-dimensional models of tumor histopathology and magnetic resonance imaging. ''Sci Rep''. 2025 Jan 13; '''15''' (1):1888
Compositional editing of extracellular matrices by CRISPR/Cas9 engineering of human mesenchymal stem cell lines.
Description: Prithiviraj, Sujeethkumar, et al. Compositional editing of extracellular matrices by CRISPR/Cas9 engineering of human mesenchymal stem cell lines. ''Elife''. 2025 Mar 28; '''13''':
Noninvasive Targeted Temperature Management of the Inner Ear: Numerical Simulations and Experimental Measurements in a Human Cadaver Model.
Description: Yepes, Maria Fernanda, et al. Noninvasive Targeted Temperature Management of the Inner Ear: Numerical Simulations and Experimental Measurements in a Human Cadaver Model. ''Otol Neurotol''. 2025 Jun 1; '''46''' (5):598-604
Structure, Mechanics, and Mechanobiology of Fibrocartilage Pericellular Matrix Mediated by Type V Collagen.
Description: Wang, Chao, et al. Structure, Mechanics, and Mechanobiology of Fibrocartilage Pericellular Matrix Mediated by Type V Collagen. ''Adv Sci (Weinh)''. 2025 Aug; '''12''' (32):e14750
Increased extracellular volume after aortic valve replacement: A footprint of reverse ventricular remodeling that does not affect conduction velocity.
Description: Sobota, Vladimir, et al. Increased extracellular volume after aortic valve replacement: A footprint of reverse ventricular remodeling that does not affect conduction velocity. ''J Cardiovasc Magn Reson''. 2025 Aug 6; '''27''' (2):101936
Use of an anatomical atlas in real-time EIT reconstructions of ventilation and pulsatile perfusion in preterm infants.
Description: Rocheleau, Christopher J, et al. Use of an anatomical atlas in real-time EIT reconstructions of ventilation and pulsatile perfusion in preterm infants. ''Sci Rep''. 2025 Aug 13; '''15''' (1):29622
Correlative imaging integrates electrophysiology with three-dimensional murine heart reconstruction to reveal electrical coupling between cell types.
Description: Giardini, Francesco, et al. Correlative imaging integrates electrophysiology with three-dimensional murine heart reconstruction to reveal electrical coupling between cell types. ''Nat Cardiovasc Res''. 2025 Nov; '''4''' (11):1466-1486