PubMed Mentions
The links below are to publications on PubMed referring to MRtrix. This list is gathered weekly from PubMed automatically.
| Publication/References | |
| Anatomically constrained tractography facilitates biologically plausible fiber reconstruction of the optic radiation in multiple sclerosis. Description: Horbruegger, M, et al. Anatomically constrained tractography facilitates biologically plausible fiber reconstruction of the optic radiation in multiple sclerosis. ''Neuroimage Clin''. 2019; '''22''': 101740 | |
| Fiber-distance-based unsupervised clustering of MR tractography data. Description: Choi, Sang-Han, et al. Fiber-distance-based unsupervised clustering of MR tractography data. ''J Neurosci Methods''. 2019 Sep 1; '''325''': 108361 | |
| Microstructural correlates of (23)Na relaxation in human brain at 7 Tesla. Description: Kolbe, Scott C, et al. Microstructural correlates of (23)Na relaxation in human brain at 7 Tesla. ''Neuroimage''. 2020 May 1; '''211''': 116609 | |
| Demyelination-Remyelination of the Rat Caudal Cerebellar Peduncle Evaluated with Magnetic Resonance Imaging. Description: Cisneros-Mejorado, Abraham J, et al. Demyelination-Remyelination of the Rat Caudal Cerebellar Peduncle Evaluated with Magnetic Resonance Imaging. ''Neuroscience''. 2020 Jul 15; '''439''': 255-267 | |
| The Bayesian Virtual Epileptic Patient: A probabilistic framework designed to infer the spatial map of epileptogenicity in a personalized large-scale brain model of epilepsy spread. Description: Hashemi, M, et al. The Bayesian Virtual Epileptic Patient: A probabilistic framework designed to infer the spatial map of epileptogenicity in a personalized large-scale brain model of epilepsy spread. ''Neuroimage''. 2020 Aug 15; '''217''': 116839 | |
| TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity. Description: Theaud, Guillaume, et al. TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity. ''Neuroimage''. 2020 Sep; '''218''': 116889 | |
| Compensatory brainstem functional and structural connectivity in patients with degenerative cervical myelopathy by probabilistic tractography and functional MRI. Description: Wang, Chencai, et al. Compensatory brainstem functional and structural connectivity in patients with degenerative cervical myelopathy by probabilistic tractography and functional MRI. ''Brain Res''. 2020 Dec 15; '''1749''': 147129 | |
| Chronobiotic effect of melatonin in experimental optic neuritis. Description: Aranda, Marcos L, et al. Chronobiotic effect of melatonin in experimental optic neuritis. ''Neuropharmacology''. 2021 Jan; '''182''': 108401 | |
| Structure-function coupling in the human connectome: A machine learning approach. Description: Sarwar, T, et al. Structure-function coupling in the human connectome: A machine learning approach. ''Neuroimage''. 2021 Feb 1; '''226''': 117609 | |
| Multi-tissue spherical deconvolution of tensor-valued diffusion MRI. Description: Jeurissen, Ben, et al. Multi-tissue spherical deconvolution of tensor-valued diffusion MRI. ''Neuroimage''. 2021 Dec 15; '''245''': 118717 | |
| Nonparametric D-R(1)-R(2) distribution MRI of the living human brain. Description: Martin, Jan, et al. Nonparametric D-R(1)-R(2) distribution MRI of the living human brain. ''Neuroimage''. 2021 Dec 15; '''245''': 118753 | |
| Investigating Tissue-Specific Abnormalities in Alzheimer's Disease with Multi-Shell Diffusion MRI. Description: Giraldo, Diana L, et al. Investigating Tissue-Specific Abnormalities in Alzheimer's Disease with Multi-Shell Diffusion MRI. ''J Alzheimers Dis''. 2022; '''90''' (4):1771-1791 | |
| Comparative brain structure and visual processing in octopus from different habitats. Description: Chung, Wen-Sung, et al. Comparative brain structure and visual processing in octopus from different habitats. ''Curr Biol''. 2022 Jan 10; '''32''' (1):97-110.e4 | |
| High-resolution virtual brain modeling personalizes deep brain stimulation for treatment-resistant depression: Spatiotemporal response characteristics following stimulation of neural fiber pathways. Description: An, Sora, et al. High-resolution virtual brain modeling personalizes deep brain stimulation for treatment-resistant depression: Spatiotemporal response characteristics following stimulation of neural fiber pathways. ''Neuroimage''. 2022 Apr 1; '''249''': 118848 | |
| Support vector machine learning and diffusion-derived structural networks predict amyloid quantity and cognition in adults with Down's syndrome. Description: Brown, Stephanie S G, et al. Support vector machine learning and diffusion-derived structural networks predict amyloid quantity and cognition in adults with Down's syndrome. ''Neurobiol Aging''. 2022 Jul; '''115''': 112-121 | |
| Cerebral cortex layer segmentation using diffusion magnetic resonance imaging in vivo with applications to laminar connections and working memory analysis. Description: Zhang, Jie, et al. Cerebral cortex layer segmentation using diffusion magnetic resonance imaging in vivo with applications to laminar connections and working memory analysis. ''Hum Brain Mapp''. 2022 Dec 1; '''43''' (17):5220-5234 | |
| In vivo tractography of human locus coeruleus-relation to 7T resting state fMRI, psychological measures and single subject validity. Description: Liebe, Thomas, et al. In vivo tractography of human locus coeruleus-relation to 7T resting state fMRI, psychological measures and single subject validity. ''Mol Psychiatry''. 2022 Dec; '''27''' (12):4984-4993 | |
| Characterization of the angular gyrus in an older adult population: a multimodal multilevel approach. Description: Jockwitz, Christiane, et al. Characterization of the angular gyrus in an older adult population: a multimodal multilevel approach. ''Brain Struct Funct''. 2023 Jan; '''228''' (1):83-102 | |
| Microstructural Neurodegeneration of the Entorhinal-Hippocampus Pathway along the Alzheimer's Disease Continuum. Description: Uchida, Yuto, et al. Microstructural Neurodegeneration of the Entorhinal-Hippocampus Pathway along the Alzheimer's Disease Continuum. ''J Alzheimers Dis''. 2023; '''95''' (3):1107-1117 | |
| Microstructural mapping of dentate gyrus pathology in Alzheimer's disease: A 16.4 Tesla MRI study. Description: Shih, Nien-Chu, et al. Microstructural mapping of dentate gyrus pathology in Alzheimer's disease: A 16.4 Tesla MRI study. ''Neuroimage Clin''. 2023 Jan 5; '''37''': 103318 | |
| Anatomically informed multi-level fiber tractography for targeted virtual dissection. Description: Zhylka, Andrey, et al. Anatomically informed multi-level fiber tractography for targeted virtual dissection. ''MAGMA''. 2023 Feb; '''36''' (1):79-93 | |
| Diffusion tensor imaging metrics associated with future disability in multiple sclerosis. Description: Lopez-Soley, E, et al. Diffusion tensor imaging metrics associated with future disability in multiple sclerosis. ''Sci Rep''. 2023 Mar 2; '''13''' (1):3565 | |
| Reproducible Microstructural Changes in the Brain Associated With the Presence and Severity of Urologic Chronic Pelvic Pain Syndrome (UCPPS): A 3-Year Longitudinal Diffusion Tensor Imaging Study From the MAPP Network. Description: Wang, Chencai, et al. Reproducible Microstructural Changes in the Brain Associated With the Presence and Severity of Urologic Chronic Pelvic Pain Syndrome (UCPPS): A 3-Year Longitudinal Diffusion Tensor Imaging Study From the MAPP Network. ''J Pain''. 2023 Apr; '''24''' (4):627-642 | |
| Reproducible Tract Profiles 2 (RTP2) suite, from diffusion MRI acquisition to clinical practice and research. Description: Lerma-Usabiaga, Garikoitz, et al. Reproducible Tract Profiles 2 (RTP2) suite, from diffusion MRI acquisition to clinical practice and research. ''Sci Rep''. 2023 Apr 12; '''13''' (1):6010 | |
| Dysfunction of the hypothalamic-pituitary adrenal axis and its influence on aging: the role of the hypothalamus. Description: Spindler, Melanie, et al. Dysfunction of the hypothalamic-pituitary adrenal axis and its influence on aging: the role of the hypothalamus. ''Sci Rep''. 2023 Apr 27; '''13''' (1):6866 | |
| Early childhood household instability, adolescent structural neural network architecture, and young adulthood depression: A 21-year longitudinal study. Description: Hardi, Felicia A, et al. Early childhood household instability, adolescent structural neural network architecture, and young adulthood depression: A 21-year longitudinal study. ''Dev Cogn Neurosci''. 2023 May 10; '''61''': 101253 | |
| Multimodal MRI improves diagnostic accuracy and sensitivity to longitudinal change in amyotrophic lateral sclerosis. Description: Pisharady, Pramod Kumar, et al. Multimodal MRI improves diagnostic accuracy and sensitivity to longitudinal change in amyotrophic lateral sclerosis. ''Commun Med (Lond)''. 2023 Jun 16; '''3''' (1):84 | |
| Oligodendrogliomas tend to infiltrate the frontal aslant tract, whereas astrocytomas tend to displace it. Description: Landers, M J F, et al. Oligodendrogliomas tend to infiltrate the frontal aslant tract, whereas astrocytomas tend to displace it. ''Neuroradiology''. 2023 Jul; '''65''' (7):1127-1131 | |
| Cortical structural and functional coupling during development and implications for attention deficit hyperactivity disorder. Description: Soman, Shania Mereen, et al. Cortical structural and functional coupling during development and implications for attention deficit hyperactivity disorder. ''Transl Psychiatry''. 2023 Jul 11; '''13''' (1):252 | |
| Clinical Significance of Diffusion Tensor Imaging in Metachromatic Leukodystrophy. Description: Amedick, Lucas Bastian, et al. Clinical Significance of Diffusion Tensor Imaging in Metachromatic Leukodystrophy. ''Neuropediatrics''. 2023 Aug; '''54''' (4):244-252 | |
| Assessing robustness of quantitative susceptibility-based MRI radiomic features in patients with multiple sclerosis. Description: Fiscone, Cristiana, et al. Assessing robustness of quantitative susceptibility-based MRI radiomic features in patients with multiple sclerosis. ''Sci Rep''. 2023 Sep 27; '''13''' (1):16239 | |
| Single-subject electroencephalography measurement of interhemispheric transfer time for the in-vivo estimation of axonal morphology. Description: Oliveira, Rita, et al. Single-subject electroencephalography measurement of interhemispheric transfer time for the in-vivo estimation of axonal morphology. ''Hum Brain Mapp''. 2023 Oct 1; '''44''' (14):4859-4874 | |
| HumanBrainAtlas: an in vivo MRI dataset for detailed segmentations. Description: Schira, Mark M, et al. HumanBrainAtlas: an in vivo MRI dataset for detailed segmentations. ''Brain Struct Funct''. 2023 Nov; '''228''' (8):1849-1863 | |
| Evidence for adaptive myelination of subcortical shortcuts for visual motion perception in healthy adults. Description: Rowe, Elise G, et al. Evidence for adaptive myelination of subcortical shortcuts for visual motion perception in healthy adults. ''Hum Brain Mapp''. 2023 Dec 1; '''44''' (17):5641-5654 | |
| Microstructural white matter integrity in relation to vascular reactivity in Dutch-type hereditary cerebral amyloid angiopathy. Description: Schipper, Manon R, et al. Microstructural white matter integrity in relation to vascular reactivity in Dutch-type hereditary cerebral amyloid angiopathy. ''J Cereb Blood Flow Metab''. 2023 Dec; '''43''' (12):2144-2155 | |
| APOE varepsilon4 exacerbates age-dependent deficits in cortical microstructure. Description: Mak, Elijah, et al. APOE varepsilon4 exacerbates age-dependent deficits in cortical microstructure. ''Brain Commun''. 2024; '''6''' (1):fcad351 | |
| beta-carbolines that enhance GABA(A) receptor response expressed in oligodendrocytes promote remyelination in an in vivo rat model of focal demyelination. Description: Cisneros-Mejorado, Abraham Jotssel, et al. beta-carbolines that enhance GABA(A) receptor response expressed in oligodendrocytes promote remyelination in an in vivo rat model of focal demyelination. ''Front Cell Neurosci''. 2024; '''18''': 1369730 | |
| Diffusion imaging markers of accelerated aging of the lower cingulum in subjective cognitive decline. Description: Flaherty, Ryn, et al. Diffusion imaging markers of accelerated aging of the lower cingulum in subjective cognitive decline. ''Front Neurol''. 2024; '''15''': 1360273 | |
| Down-sampling in diffusion MRI: a bundle-specific DTI and NODDI study. Description: Spagnolo, Federico, et al. Down-sampling in diffusion MRI: a bundle-specific DTI and NODDI study. ''Front Neuroimaging''. 2024; '''3''': 1359589 | |
| Parkinson's Disease Risk Variant rs9638616 is Non-Specifically Associated with Altered Brain Structure and Function. Description: Welton, Thomas, et al. Parkinson's Disease Risk Variant rs9638616 is Non-Specifically Associated with Altered Brain Structure and Function. ''J Parkinsons Dis''. 2024; '''14''' (4):713-724 | |
| The PREVENT dementia programme: baseline demographic, lifestyle, imaging and cognitive data from a midlife cohort study investigating risk factors for dementia. Description: Ritchie, Craig W, et al. The PREVENT dementia programme: baseline demographic, lifestyle, imaging and cognitive data from a midlife cohort study investigating risk factors for dementia. ''Brain Commun''. 2024; '''6''' (3):fcae189 | |
| The Subcortical Atlas of the Marmoset ("SAM") monkey based on high-resolution MRI and histology. Description: Saleem, Kadharbatcha S, et al. The Subcortical Atlas of the Marmoset ("SAM") monkey based on high-resolution MRI and histology. ''bioRxiv''. 2024 Jan 8; | |
| Structural connectome architecture shapes the maturation of cortical morphology from childhood to adolescence. Description: Liang, Xinyuan, et al. Structural connectome architecture shapes the maturation of cortical morphology from childhood to adolescence. ''Nat Commun''. 2024 Jan 26; '''15''' (1):784 | |
| Cortical and subcortical microstructure integrity changes after repetitive transcranial magnetic stimulation therapy in cocaine use disorder and relates to clinical outcomes. Description: Rasgado-Toledo, Jalil, et al. Cortical and subcortical microstructure integrity changes after repetitive transcranial magnetic stimulation therapy in cocaine use disorder and relates to clinical outcomes. ''Addict Biol''. 2024 Feb; '''29''' (2):e13381 | |
| Human lower leg muscles grow asynchronously. Description: Chow, Brian V Y, et al. Human lower leg muscles grow asynchronously. ''J Anat''. 2024 Mar; '''244''' (3):476-485 | |
| Diffusion tensor imaging of white-matter structural features of maltreating mothers and their associations with intergenerational chain of childhood abuse. Description: Kurata, Sawa, et al. Diffusion tensor imaging of white-matter structural features of maltreating mothers and their associations with intergenerational chain of childhood abuse. ''Sci Rep''. 2024 Mar 7; '''14''' (1):5671 | |
| Evaluation of Whole Brain Intravoxel Incoherent Motion (IVIM) Imaging. Description: Lipinski, Kamil, et al. Evaluation of Whole Brain Intravoxel Incoherent Motion (IVIM) Imaging. ''Diagnostics (Basel)''. 2024 Mar 20; '''14''' (6): | |
| White adipose tissue distribution and amount are associated with increased white matter connectivity. Description: Okudzhava, Liana, et al. White adipose tissue distribution and amount are associated with increased white matter connectivity. ''Hum Brain Mapp''. 2024 Apr; '''45''' (5):e26654 | |
| Human connectome topology directs cortical traveling waves and shapes frequency gradients. Description: Koller, Dominik P, et al. Human connectome topology directs cortical traveling waves and shapes frequency gradients. ''Nat Commun''. 2024 Apr 26; '''15''' (1):3570 | |
| Microscopic fractional anisotropy outperforms multiple sclerosis lesion assessment and clinical outcome associations over standard fractional anisotropy tensor. Description: Vivo, F, et al. Microscopic fractional anisotropy outperforms multiple sclerosis lesion assessment and clinical outcome associations over standard fractional anisotropy tensor. ''Hum Brain Mapp''. 2024 Jun 1; '''45''' (8):e26706 | |
| N-butyl-beta-carboline-3-carboxylate (beta-CCB) systemic administration promotes remyelination in the cuprizone demyelinating model in mice. Description: Velez-Uriza, Fidel, et al. N-butyl-beta-carboline-3-carboxylate (beta-CCB) systemic administration promotes remyelination in the cuprizone demyelinating model in mice. ''Sci Rep''. 2024 Jun 18; '''14''' (1):13988 |