Tool/Resource: NBS-Predict: A Prediction-based Extension of the Network-based Statistic - News

NBS-Predict v1.0.0-beta.12 released

afarensis@stage.nitrcce.org (Emin Serin) — Thu, 04 Apr 2024 13:27:22 GMT

We reintroduced leave-one-out cross-validation (LOOCV) to classification and fixed minor bugs in our GUI. Note that LOOCV is not available for regression.

Don't hesitate to try out our updated features and take your data analysis to the next level!

NBS-Predict v1.0.0-beta.11 released

afarensis@stage.nitrcce.org (Emin Serin) — Tue, 22 Aug 2023 13:29:42 GMT

We fixed minor bugs in novel data prediction and results saving.

NBS-Predict v1.0.0-beta.10_hotfix released

afarensis@stage.nitrcce.org (Emin Serin) — Fri, 30 Jun 2023 16:04:04 GMT

We fixed a minor bug in viewing classification results.

NBS-Predict_v1.0.0-beta.10 is now out!

afarensis@stage.nitrcce.org (Emin Serin) — Tue, 20 Jun 2023 14:14:46 GMT

NBS-Predict_v1.0.0-beta.10 is now out!

Changes:
- Simplified and refreshed GUI
- Users can now visualize positive and negative networks and combined networks in regression analyses.
- KFold used during evaluating subnetwork is set to the one the user defines if it is higher than the defined one.
- Fix minor issues in the legacy GUI
- The toolbox will run the legacy GUI if the MATLAB version is old.
- Solve compatibility issues in the GLM function.
- Redesign the Analysis Window with AppDesigner.
- Several bug fixes.

NBS-Predict_v1.0.0-beta.9 is now out!

afarensis@stage.nitrcce.org (Emin Serin) — Thu, 17 Mar 2022 13:15:38 GMT

NBS-Predict_v1.0.0-beta.8 is now out!

Changes:
- Drop Decision Tree Regressor and Classifier to avoid possible incompatibilities with confound regression.
- Minor tweaks in parallel processing.

NBS-Predict_v1.0.0-beta.8 is now out!

afarensis@stage.nitrcce.org (Emin Serin) — Tue, 08 Mar 2022 13:19:14 GMT

NBS-Predict_v1.0.0-beta.8 is now out!

Changes:
- Fix minor bug in feature selection (when confounds are provided in the
design matrix, but not specified in the contrast vector.).

NBS-Predict_v1.0.0-beta.7 is now out!

afarensis@stage.nitrcce.org (Emin Serin) — Wed, 23 Feb 2022 11:28:50 GMT

NBS-Predict_v1.0.0-beta.7 is now out!

Changes:
- Trained model is now automatically extracted.
- Add function (NBSPredict_predict) to predict novel data using the trained model.
- Refactor several functions to make them compatible with the novel data prediction function.
- The symmetry of the connectivity matrices is now automatically checked.
- Fix minor GUI issue in the results viewer window.
- Fix edge weight issue when MAD, MSE, or RMSE is chosen.
- Users can also provide a directory for holdout data.
- Refactor load functions to be compatible for loading a single dataset file (NodesxNodesxSubjects).

NBS-Predict_v1.0.0-beta.6 is now out!

afarensis@stage.nitrcce.org (Emin Serin) — Tue, 01 Feb 2022 16:41:45 GMT

NBS-Predict_v1.0.0-beta.6 is now out!

Changes:
- User can specify the number of CPU cores to use.
- Fix minor bug in Elastic Net function.
- Add a progress bar for loading connectivity matrices on the command window.
- Minor change in loadData function to fasten .csv loading.
- Add balanced accuracy metric to measure accuracy in imbalanced datasets.
- Add permutation testing to compare model performance against null distribution.

NBS-Predict_v1.0.0-beta.5 is now out!

afarensis@stage.nitrcce.org (Emin Serin) — Fri, 05 Nov 2021 13:12:12 GMT

NBS-Predict v1.0.0-beta.5 is now out!

Changes:
- NBS-Predict now has Workspace!
- GUI history has been reactivated!
- Fix bug in confusion matrix visualization.
- Fix minor bugs in GUI.
- Update user MANUAL.
- Fix compatibility issues.

NBS-Predict v1.0.0-beta.4 is now out!

afarensis@stage.nitrcce.org (Emin Serin) — Thu, 28 Oct 2021 17:29:35 GMT

NBS-Predict v1.0.0-beta.4 is now out!

Changes:
- This version fixes the "check_classification function is not found" issue.