MASIMatlab Releases

masimatlab Deep learning bias and variance (HARDI)

hainliae@stage.nitrcce.org (Allison Hainline) — Thu, 13 Sep 2018 21:33:00 GMT

masimatlab SLANT_test_MRI_MPRAGE_volume

yuankaihuo@stage.nitrcce.org (Yuankai Huo) — Mon, 28 May 2018 20:32:00 GMT

masimatlab Deep_Linkage_Histology_NN

nathv@stage.nitrcce.org (Vishwesh Nath) — Tue, 14 Nov 2017 19:50:00 GMT

DNN v1.

masimatlab SIMEX on HARDI

hainliae@stage.nitrcce.org (Allison Hainline) — Wed, 20 Sep 2017 20:40:00 GMT

masimatlab Abmusclefat_release

yuankaihuo@stage.nitrcce.org (Yuankai Huo) — Fri, 14 Jul 2017 3:30:00 GMT

Source code of "Automated Characterization of Body Composition and Frailty with Clinically Acquired CT", Peijun Hu, Yuankai Huo, Dexing Kong, J. Jeffrey Carr, Richard G. Abramson, Katherine G. Hartley, Bennett A. Landman

masimatlab TICV_BC2atlases_20160823

yuankaihuo@stage.nitrcce.org (Yuankai Huo) — Wed, 24 Aug 2016 3:14:00 GMT

Please cite the following paper if using the atases:
Yuankai Huo, Andrew J. Asman, Andrew J. Plassard, Bennett A. Landman. "Simultaneous total intracranial volume and posterior fossa volume estimation using Non-local Spatial STAPLE label fusion." Human Brain Mapping. 2016

masimatlab C-RCS regression

yuankaihuo@stage.nitrcce.org (Yuankai Huo) — Tue, 07 Jun 2016 3:03:00 GMT

Covariate-Adjusted Restricted Cubic Spline Regression (C-RCS) or (CRCS)
The code is corresponding to the following paper (please cite if using this code)
Yuankai Huo, Katherine Aboud, Hakmook Kang, Laurie E. Cutting, Bennett A. Landman, "Mapping Lifetime Brain Volumetry with Covariate-Adjusted Restricted Cubic Spline Regression from Cross-sectional Multi-site MRI". In International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), Athens, Greece, October 2016

The package contains 3 files:
CRCS_demo.m : is an example to conduct C-RCS regression
crcs.m : is the C-RCS regression
fit_crcs.m : to fit C-RCS regression results

MATLAB release MATLAB 8.4 (R2014b)

masimatlab SCFusion_Demo

robharrigan@stage.nitrcce.org (Rob Harrigan) — Wed, 20 May 2015 19:54:00 GMT

Source code and example image for the spinal cord fusion algorithm.

Contact author: Robert Harrigan, rob.l.harrigan@vanderbilt.edu
Vanderbilt University - MASI Lab

Algorithm information: https://masi.vuse.vanderbilt.edu/index.php/Groupwise_Multi-Atlas_Segmentation_of_the_Spinal_Cord%E2%80%99s_Internal_Structure
Full manuscript: http://dx.doi.org/10.1016/j.media.2014.01.003

masimatlab QA_DTI_Pipeline

nmrgirl@stage.nitrcce.org (Carolyn Lauzon) — Wed, 15 Aug 2012 20:48:00 GMT

masimatlab SIMEX demo

nmrgirl@stage.nitrcce.org (Carolyn Lauzon) — Tue, 10 Apr 2012 21:04:00 GMT

This release is a demo program that examples experiments and data from the following reference:

April 10, 2012: First release.