NeuroDOT Releases

GitHub_Releases NeuroDOT v1.6 (v1.6)

adameggebrecht@stage.nitrcce.org (Adam Eggebrecht) — Fri, 24 Oct 2025 21:54:37 GMT

Changes since NeuroDOT v1.5:

1. System & Format Compatibility
- NeuroDOT has been fully tested and verified in Matlab R2024b.
- Ndot2snirf: Update SNIRF “stim” field to accurately reflect stimulus duration times for compatibility with the Pysnirf2 validator.

2. Dependencies:
- Updated list of Matlab toolbox dependencies, now located in the Getting Started tutorial and in the NeuroDOT README.

3. Pipelines:
- Added visualization of the flat field reconstruction on MNI ... <a href="https://github.com/WUSTL-ORL/NeuroDOT/releases/tag/v1.6">see more</a>

GitHub_Releases NeuroDOT v1.5 (v1.5)

adameggebrecht@stage.nitrcce.org (Adam Eggebrecht) — Thu, 22 May 2025 21:45:04 GMT

Changes since NeuroDOT v1.4:

1. System & Format Compatibility
- Update lumo2ndot: Extract LUMO saturation, accelerometer, and gyroscope data
- Ndot2snirf: Update SNIRF “aux” field to accommodate Matlab and Python SNIRF loaders

2. Artifact Detection:
- FindGoodMeas
- Add params.DtKeep to check the maximum absolute difference between samples
- Add params.FloorTh to identify low light-level measurements
- Add optional params.AbsDiff to check the absolute differen ... <a href="https://github.com/WUSTL-ORL/NeuroDOT/releases/tag/v1.5">see more</a>

GitHub_Releases NeuroDOT v1.4 (v1.4)

adameggebrecht@stage.nitrcce.org (Adam Eggebrecht) — Thu, 17 Oct 2024 20:02:43 GMT

Changes since NeuroDOT v1.3:

1. GUIs
- NeuroDOT Render Tool: interactive GUI to select a NIfTI or 4dfp overlay and render the data on a default or custom cortical mesh. Alternatively, data may be passed to the app directly from the command line or from within a script.

2. Format Compatibility updates:
- SaveVolumetricData: added option for saving in nii.gz format
- snirf2ndot: updated to work on variables in the workspace, in addition to optionally accepting file inputs
- lum ... <a href="https://github.com/WUSTL-ORL/NeuroDOT/releases/tag/v1.4">see more</a>

Data Tripathy Fogarty et. al. 2024

espeh@stage.nitrcce.org (Emma Speh) — Thu, 11 Jul 2024 20:42:00 GMT

GitHub_Releases NeuroDOT_py

espeh@stage.nitrcce.org (Emma Speh) — Fri, 19 Apr 2024 16:30:00 GMT

Workshops sfNIRS 2024 Workshop

espeh@stage.nitrcce.org (Emma Speh) — Fri, 19 Apr 2024 16:28:00 GMT

Workshops OHBM 2022 Workshop

espeh@stage.nitrcce.org (Emma Speh) — Fri, 19 Apr 2024 16:27:00 GMT

Workshops sfNIRS 2022 Workshop

espeh@stage.nitrcce.org (Emma Speh) — Fri, 19 Apr 2024 16:24:00 GMT

GitHub_Releases NeuroDOT v1.3 (v1.3)

espeh@stage.nitrcce.org (Emma Speh) — Fri, 01 Mar 2024 19:57:22 GMT

**Changes since NeuroDOT v1.2:**

**1. Updates to Visualization functions:**
- PlotCapData: updated source/detector spacing
- PlotMeshSurface: fixed facecolor parameter for case without data
- PlotSlices, PlotSlice, PlotSlicesTimeTrace: adjusted colorbar settings, added white background ‘bgW’ parameter
- Plot_RawData_Metrics_I_DQC: added params.LFO_GI to select which measurments to show in LFO plot
- Applycmap: compatibility with params.BG when all elements are equal to zero
- Adjus ... <a href="https://github.com/WUSTL-ORL/NeuroDOT/releases/tag/v1.3">see more</a>

Support Files XNAT_and_OXI_Support_Files

espeh@stage.nitrcce.org (Emma Speh) — Tue, 09 Jan 2024 18:28:00 GMT