VisuAlign - Nonlinear adjustments after QuickNII Releases

VisuAlign for Windows Tools

gergelyc@stage.nitrcce.org (Gergely Csucs) — Wed, 15 Jun 2022 10:49:00 GMT

VisuAlign for Mac 0.9

gergelyc@stage.nitrcce.org (Gergely Csucs) — Mon, 11 Oct 2021 16:17:00 GMT

Known issue: Mac OS Big Sur may report that VisuAlign needs keyboard input from other applications. This seems to be an inherent capability of the underlying technology, but VisuAlign doesn't actually use or need it, it's safe to select "Deny", we did the same when testing VisuAlign on Mac.

VisuAlign for Windows 0.9

gergelyc@stage.nitrcce.org (Gergely Csucs) — Mon, 11 Oct 2021 11:29:00 GMT

VisuAlign for Mac 0.8

gergelyc@stage.nitrcce.org (Gergely Csucs) — Wed, 20 May 2020 12:29:00 GMT

VisuAlign-v0_8-WHS_Rat_v3_fix.dmg fixes a single label in the WHS Rat v3 segmentation. Everything else is unaffected (the program itself, mouse atlases and WHS Rat v2).

Technical details: https://www.nitrc.org/frs/?group_id=1081 v3.00 actually contains remnants of the generic "inner ear" structure, label 44, despite of the intent for its complete replacement with higher granularity ones (cochlea, vestibular apparatus, spiral ganglion and friends). This update puts the descriptor back into the label file, with white color to reduce visibility (well, on white-background images at least).

VisuAlign for Windows 0.8

gergelyc@stage.nitrcce.org (Gergely Csucs) — Thu, 23 Jan 2020 17:07:00 GMT

VisuAlign-v0_8-WHS_Rat_v3_fix.zip fixes a single label in the WHS Rat v3 segmentation. Everything else is unaffected (the program itself, mouse atlases and WHS Rat v2).

Technical details: https://www.nitrc.org/frs/?group_id=1081 v3.00 actually contains remnants of the generic "inner ear" structure, label 44, despite of the intent for its complete replacement with higher granularity ones (cochlea, vestibular apparatus, spiral ganglion and friends). This update puts the descriptor back into the label file, with white color to reduce visibility (well, on white-background images at least).

visualign Demo dataset

gergelyc@stage.nitrcce.org (Gergely Csucs) — Thu, 23 Jan 2020 16:22:00 GMT