mircen_macset MIRCen macaque validation dataset

balbasty@stage.nitrcce.org (Yaël Balbastre) — Tue, 08 Aug 2017 16:02:00 GMT

[b][i]Authors[/i][/b]

This dataset was produced in [url=http://i2bm.cea.fr/drf/i2bm/Pages/mircen.aspx]MIRCen[/url], a CEA preclinical imaging research center, with help from our BrainVISA friends at [url=http://i2bm.cea.fr/drf/i2bm/english/Pages/NeuroSpin/Presentation.aspx]NeuroSpin[/url].
It was used to validate Primatologist, a [url=http://www.brainvisa.info]BrainVISA[/url] toolbox and pipeline dedicated to Macaque brain MRI segmentation.

This dataset and the Primatologist toolbox are maintained by the members of the bioPICSEL team in MIRCEn (T. Delzescaux, A.-S. Hérard, N. Souedet) and Y. Balbastre.
For contact, try brainrat@cea.fr or yael.balbastre@gmail.com (Hopefully, one of the two will answer). You can also try your chance on the [url=http://www.brainvisa.info/forum]BrainVISA forum[/url].

[i][b]License & citation[/b][/i]

This is a publicly available validation dataset for Macaque brain MRI segmentation. It is provided under a GPL-compatible [url=http://www.cecill.info/licences/Licence_CeCILL_V2.1-en.txt]CeCILL v2.1[/url] license and can be freely used for academic work upon citing the following article:[quote]Balbastre, Y., Rivière, D., Souedet, N., Fischer, C., Hérard, A.-S., Williams, S., Vandenberghe, M.E., Flament, J., Aron-Badin, R., Hantraye, P., Mangin, J.-F., Delzescaux, T., 2017. "A validation dataset for Macaque brain MRI segmentation". Data In Brief (submitted).[/quote]
It is highly recommended to read the aforementioned paper as it describes in details this package.

[i][b]Checksums[/b][/i]

A few checksums are provided in order to check the integrity of the dowloaded archive.
You can use them by downloading both the archive and the checksum and calling the appropriate checksum function:[code]md5sum -c mircen_macset.tar.gz.md5[/code][code]sha1sum -c mircen_macset.tar.gz.sha1[/code][code]sha256sum -c mircen_macset.tar.gz.sha256[/code][code]sha512sum -c mircen_macset.tar.gz.sha512[/code]

MIRCen Macaca fascicularis brain MRI segmentation dataset Releases

mircen_macset MIRCen macaque validation dataset