NITRC MIITRA atlas Forum: help

RE: Adding MIITRA as a custom template on fMRIprep

ariri — Tue, 19 Mar 2024 14:15:14 GMT

Would it also be possible for you to upload the MIITRA 1.0 res T1 as a custom template in fMRIprep? It would be really helpful for researchers to use it for their aging studies. Thank you! 
 
Originally posted by Konstantinos Arfanakis:
<blockquote>
Thank you for your question. We will provide the .json file shortly. Please check back in the Downloads section.
Thank you! 
</blockquote>

RE: Adding MIITRA as a custom template on fMRIprep

Konstantinos Arfanakis — Fri, 15 Mar 2024 15:00:18 GMT

Thank you for your question. We will provide the .json file shortly. Please check back in the Downloads section.
Thank you!

Adding MIITRA as a custom template on fMRIprep

ariri — Thu, 14 Mar 2024 17:53:25 GMT

hello, one of the pre-requisites for using custom templates in fMRIprep is having the metadata (.json file). Does the metadata file exist for the MIITRA T1 template?

RE: Welcome to Help

Konstantinos Arfanakis — Thu, 02 Mar 2023 3:45:07 GMT

Hello mlm144,

Thank you for your message. You actually do not need a 2mm template. The 1mm template will work with your 2mm data and will probably work better than a 2mm version. We are not planning to introduce a 2mm version. I suggest you give the 1mm version a try.

Finally, I should point out that the MIITRA template is unrelated to MNI.

Don't hesitate to send any additional questions.

Regards,
Konstantinos

RE: Welcome to Help

mlm144 — Wed, 01 Mar 2023 21:17:46 GMT

Hello,

I would love to use this older adult MNI template, but unfortunately all of my T1 images are are 2mm. Will you be releasing a 2mm version of this template in the future?

Thanks!

RE: Welcome to Help

Abdur Raquib Ridwan — Fri, 07 May 2021 14:08:00 GMT

Welcome to Help

Konstantinos Arfanakis — Thu, 17 Oct 2019 2:26:45 GMT

Welcome to Help