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  <title>NITRC MABMIS for Slicer 4: Multi-Atlas Based Multi-Image Segmentation Forum: help</title>
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   <title>Is there a log with description of errors?</title>
   <link>http://stage.nitrcce.org/forum/forum.php?thread_id=4351&amp;forum_id=4031</link>
   <description>Hello Xiafoeng and colleagues!&lt;br /&gt;
&lt;br /&gt;
Congrats on your work. I have tried your demo data, and now moving on testing real data.&lt;br /&gt;
&lt;br /&gt;
On first try, Slicer crashed, but I realized that I had skipped some pre-processing steps!&lt;br /&gt;
&lt;br /&gt;
I aligned and data and cropped it, in such a way that every dataset has the same dimension, and same (isotropic) spacing.&lt;br /&gt;
&lt;br /&gt;
Now, Slicer does not crash, but MABMIS says: &amp;quot;Status: Completed with Errors&amp;quot;.&lt;br /&gt;
(In the atlas folder, the training data and respective segmentations got copied)&lt;br /&gt;
&lt;br /&gt;
Is there a log file somewhere? Where can I get more information about what went wrong?&lt;br /&gt;
&lt;br /&gt;
Cheers&lt;br /&gt;
&lt;br /&gt;
Hugues&lt;br /&gt;
&lt;br /&gt;
Additional info:&lt;br /&gt;
a) I used NRRD file format.&lt;br /&gt;
b) I only have one class of label, representing one structure.</description>
   <author>Hugues Fontenelle</author>
   <pubDate>Tue, 11 Feb 2014 16:19:58 GMT</pubDate>
   <guid>http://stage.nitrcce.org/forum/forum.php?thread_id=4351&amp;forum_id=4031</guid>
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  <item>
   <title>Welcome to Help</title>
   <link>http://stage.nitrcce.org/forum/forum.php?thread_id=4284&amp;forum_id=4031</link>
   <description>Welcome to Help</description>
   <author>Xiafoeng Liu</author>
   <pubDate>Mon, 06 Jan 2014 20:26:36 GMT</pubDate>
   <guid>http://stage.nitrcce.org/forum/forum.php?thread_id=4284&amp;forum_id=4031</guid>
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