Trouble building for MAC OSX 10.12.6

Ahmed Radwan — Fri, 08 Jun 2018 12:35:43 GMT

Greetings,

I've downloaded your source code and and was trying to build it following the instructions in you readme file but it's not working.

First I use ccmake .
then in ccmake I press c, then generate
then in terminal again I use make, and this is what comes up:

Scanning dependencies of target bl
[ 16%] Building CXX object CMakeFiles/bl.dir/CorrectiveLearning/BiasLearn.cxx.o
In file included from /Users/aradwa0/Downloads/PICSL_MALF/CorrectiveLearning/BiasLearn.cxx:6:
/Users/aradwa0/Downloads/PICSL_MALF/CorrectiveLearning/AdaBoost.h:256:5: warning: 'delete' applied to a pointer that was allocated with 'new[]'; did you mean 'delete[]'?
[-Wmismatched-new-delete]
delete tX;
^
[]
/Users/aradwa0/Downloads/PICSL_MALF/CorrectiveLearning/AdaBoost.h:138:15: note: allocated with 'new[]' here
node * tX=new node[NSample];
^
/Users/aradwa0/Downloads/PICSL_MALF/CorrectiveLearning/AdaBoost.h:257:5: warning: 'delete' applied to a pointer that was allocated with 'new[]'; did you mean 'delete[]'?
[-Wmismatched-new-delete]
delete W;
^
[]
/Users/aradwa0/Downloads/PICSL_MALF/CorrectiveLearning/AdaBoost.h:135:16: note: allocated with 'new[]' here
double *W= new double[NSample], tw=1.0/NSample, R;
^
/Users/aradwa0/Downloads/PICSL_MALF/CorrectiveLearning/AdaBoost.h:258:5: warning: 'delete' applied to a pointer that was allocated with 'new[]'; did you mean 'delete[]'?
[-Wmismatched-new-delete]
delete H;
^
[]
/Users/aradwa0/Downloads/PICSL_MALF/CorrectiveLearning/AdaBoost.h:137:18: note: allocated with 'new[]' here
double * H = new double[NSample];
^
/Users/aradwa0/Downloads/PICSL_MALF/CorrectiveLearning/AdaBoost.h:259:5: warning: 'delete' applied to a pointer that was allocated with 'new[]'; did you mean 'delete[]'?
[-Wmismatched-new-delete]
delete F;
^
[]
/Users/aradwa0/Downloads/PICSL_MALF/CorrectiveLearning/AdaBoost.h:136:45: note: allocated with 'new[]' here
double * CH = new double[NSample], *F = new double[NSample];
^
/Users/aradwa0/Downloads/PICSL_MALF/CorrectiveLearning/AdaBoost.h:260:5: warning: 'delete' applied to a pointer that was allocated with 'new[]'; did you mean 'delete[]'?
[-Wmismatched-new-delete]
delete CH;
^
[]
/Users/aradwa0/Downloads/PICSL_MALF/CorrectiveLearning/AdaBoost.h:136:19: note: allocated with 'new[]' here
double * CH = new double[NSample], *F = new double[NSample];
^
/Users/aradwa0/Downloads/PICSL_MALF/CorrectiveLearning/AdaBoost.h:261:5: warning: 'delete' applied to a pointer that was allocated with 'new[]'; did you mean 'delete[]'?
[-Wmismatched-new-delete]
delete sortidx;
^
[]
/Users/aradwa0/Downloads/PICSL_MALF/CorrectiveLearning/AdaBoost.h:177:20: note: allocated with 'new[]' here
int *sortidx = new int[NFeature * NSample];
^

6 warnings generated.
[ 33%] Linking CXX executable bl
ld: library not found for -lITKNumerics
clang: error: linker command failed with exit code 1 (use -v to see invocation)
make[2]: *** [bl] Error 1
make[1]: *** [CMakeFiles/bl.dir/all] Error 2
make: *** [all] Error 2

I would appreciate your help.

Thanks in advance,
Ahmed Radwan

RE: error allocating memory for image

Rui Xia — Tue, 18 Apr 2017 3:14:21 GMT

Hi, do you find the answer? I met the same error.

install

Pierre DEMAN — Fri, 15 Apr 2016 9:57:54 GMT

Hello,

I am trying to install PICSL_MALF for few days without success ...

I installed ITK succesfully, via the git, and I am already a ANTs user.

But when I try to install PICSL_MALF I have this error message :
/usr/bin/ld: cannot find -lITKNumerics
/usr/bin/ld: cannot find -lITKIO
collect2: error: ld returned 1 exit status
make[2]: *** [sa] Error 1
make[1]: *** [CMakeFiles/sa.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....

anyone can help ?
(I am working on ubuntu 14.04, attached is the full error message)

Regards,
Pierre

error allocating memory for image

neela ramamoorthi — Fri, 02 May 2014 18:23:47 GMT

I compiled jointlabelfusion in release mode. when executing with two atlases it shows the following error message
failed to allocate memory for image in the file itkImportImageContainer.hxx

please help me

Welcome to Help

Hongzhi Wang — Wed, 05 Sep 2012 13:54:27 GMT

Welcome to Help

NITRC PICSL Multi-Atlas Segmentation Tool Forum: help

Trouble building for MAC OSX 10.12.6

RE: error allocating memory for image

install

error allocating memory for image

Welcome to Help